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Acetoacetate decarboxylase catalyzes the decarboxylation of acetoacetate via formation of Schiff base between the ketone of acetoacetate and its Lys 115. Which of the following is most likely incorrect?

a) The measured pKa of Lys 115 is 10.54
b) Lys 115 is a potent electrophile
c) The pKa of Lys 115 is independent of its microenvironment
d) The perturbed pKa of Lys 115 is a result of interaction with Glu 76

User StaticVoid
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Final answer:

The most likely incorrect statement is that 'Lys 115 is a potent electrophile,' as lysine typically acts as a nucleophile in this context by attacking the carbonyl carbon of acetoacetate to form a Schiff base. Additionally, the pKa of Lys 115 can be influenced by its microenvironment, which contradicts the claim that it is independent.

Step-by-step explanation:

The student has asked which of the given statements about acetoacetate decarboxylase is most likely incorrect. Acetoacetate decarboxylase facilitates the decarboxylation of acetoacetate by forming a Schiff base between the ketone of acetoacetate and the enzyme's active site lysine residue, Lys 115.

Option (b), 'Lys 115 is a potent electrophile,' is incorrect. In enzyme catalysis involving lysine, the lysine typically acts as a nucleophile rather than an electrophile. It forms a Schiff base with a substrate by attacking the carbonyl carbon of the acetoacetate.

Electrophiles are generally electron-deficient and attract electron-rich nucleophiles, which is not characteristic of lysine in this context.

Moreover, option (c) suggests that 'The pKa of Lys 115 is independent of its microenvironment,' which is also likely to be incorrect. The pKa of an amino acid residue in an enzyme's active site can be significantly influenced by its microenvironment through interactions with surrounding amino acid residues, such as Glu 76.

User Jeankowkow
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