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What AAs will E3 recognize on the N-end of a protein?

A) Aspartate and Glutamate
B) Leucine and Isoleucine
C) Methionine and Alanine
D) Arginine and Lysine

1 Answer

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Final answer:

The E3 ubiquitin ligase recognizes specific degradation signals, including amino acid sequences, for ubiquitination and degradation. A) Aspartate and glutamate are negatively charged amino acids, while asparagine is neutral and lysine is positively charged.

Step-by-step explanation:

The question relates to the specificity of an E3 ubiquitin ligase recognizing amino acids at the N-terminus of a protein.

The single-letter amino acid abbreviations provided, such as Asn/N for asparagine, Lys/K for lysine, Asp/D for A) aspartic acid, and Glu/E for glutamic acid, do not directly answer the question.

However, it is important to know that E3 ubiquitin ligases often recognize specific degrons, or degradation signals, within proteins.

These signals can include specific amino acid sequences or modifications that target the protein for ubiquitination and subsequent degradation.

In the provided options, both aspartate (Asp/D) and glutamate (Glu/E) are known to be negatively charged amino acids.

Asparagine (Asn/N) and lysine (Lys/K) carry no charge or a positive charge, respectively, under physiological conditions.

The context of ubiquitination would suggest that E3 ligases look for certain signals, which might include charged residues at the N-terminus.

However, without more context regarding the specificity of the particular E3 enzyme in question, it is impossible to accurately determine which of the offered pairs of amino acids are recognized by E3 on the N-end of a protein.

User Ali Khalili
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