Final answer:
The use of uppercase and lowercase letters in genetic nomenclature helps differentiate dominant from recessive alleles, with uppercase representing dominant traits and lowercase for recessives.
Step-by-step explanation:
In genetics, it is standard to use capital and lowercase letters to distinguish between dominant and recessive alleles. For instance, in Mendel's classic pea plant experiments, the tall trait (T) is dominant, and the dwarf trait (t) is recessive. Thus a homozygous tall pea plant is represented as TT, a homozygous dwarf as tt, and a heterozygous tall plant as Tt.
Dominance means that the phenotype of the dominant allele will be expressed in both homozygous dominant (AA) and heterozygous (Aa) organisms. Fundamental to predicting phenotypes from genotypes is the understanding that a homozygous recessive organism (aa) will express the recessive trait because there is no dominant allele to mask its effect.