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Typical folded proteins have a stability ranging from 7 to 15 kcal/mole at 37°C. Stability is a measure of the equilibrium between the folded (F) and unfolded (U) forms of the protein, with the unfolded form having a greater free energy (see Figure Q4-20). For a protein with a stability of 7.1 kcal/mole, calculate the fraction of protein that would be unfolded at equilibrium at 37°C. The equilibrium constant (Keq) is related to the free energy (ΔG°) by the equation Keq = 10-ΔG°/1.42.

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Final answer:

To find the fraction of protein that is unfolded at equilibrium with a stability of 7.1 kcal/mole, we use the provided equation to calculate Keq and then express the unfolded fraction as [U]/[T]. Calculation shows that approximately 0.001% of the protein is unfolded at equilibrium.

Step-by-step explanation:

To calculate the fraction of a protein that is unfolded at equilibrium at 37°C with a stability of 7.1 kcal/mole, we need to use the given equilibrium constant (Keq) equation and relate it to the free energy change (ΔG°). The given equation for Keq in terms of ΔG° is Keq = 10-ΔG°/1.42. We can rearrange this equation to solve for the unfolded fraction of the protein (U/F).

First, calculate Keq using the stability of the protein:

Keq = 10-7.1 kcal/mole / 1.42
Keq = 10-5

Since Keq is the ratio of unfolded to folded protein ([U]/[F]), we can write the following:

Keq = [U]/[F]

By definition, at equilibrium, the total amount of protein ([T]) must be the sum of the folded and unfolded forms:

[T] = [F] + [U]

We can also express [U] as Keq multiplied by [F]:

[U] = Keq * [F]

Substituting [U] back into the total protein equation:

[T] = [F] + Keq * [F]

Since we are interested in the fraction that is unfolded ([U]/[T]), we can rearrange the previous equation to solve for [F]/[T]:

[F]/[T] = 1 / (1 + Keq)

Substitute Keq:

[F]/[T] = 1 / (1 + 10-5)

Now, solve for the unfolded fraction ([U]/[T]):

[U]/[T] = 1 - [F]/[T]

[U]/[T] = 1 - 1 / (1 + 10-5)

And upon calculation:

[U]/[T] ≈ 1 - 0.99999 = 0.00001

Therefore, the fraction of the protein that is unfolded at equilibrium at 37°C is approximately 0.00001 or 0.001%.

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