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Are there additional studies or experiments recording DNase cleavage annotations in the Drosophila genome beyond those documented by RedFly?

a. RedFly provides the only annotations for DNase cleavage sites in the Drosophila genome.
b. DNAse-seq is no longer favored, with ATAC-seq being the preferred assay for chromatin accessibility.
c. There might be additional studies using alternative methods for recording DNase cleavage sites.
d. The Drosophila regulatory database beyond RedFly is well-documented and includes diverse studies.

User Erapert
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1 Answer

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Final answer:

RedFly provides annotations for DNase cleavage sites in the Drosophila genome, but there may be additional studies using alternative methods. ATAC-seq is preferred over DNAse-seq for chromatin accessibility analysis, and there is a well-documented Drosophila regulatory database beyond RedFly.

Step-by-step explanation:

RedFly does provide annotations for DNase cleavage sites in the Drosophila genome, but there might be additional studies using alternative methods to record DNase cleavage annotations. One such alternative method is ATAC-seq, which is now preferred over DNAse-seq for chromatin accessibility analysis. The Drosophila regulatory database beyond RedFly is also well-documented and includes diverse studies on DNase cleavage sites.

User Shinebayar G
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