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Explain how certain extremophiles can survive in very basic niches (poor in protons), where the proton motive force, defined from the bulk pH, cannot sustain ATP synthesis. As far as I have been able to discover, the existence of such "surface protons" has only been shownin vitro(e.g. in a sustained lipid bilayer). Is there any experimental evidence of such "surface protons" in intact cells, vivo?

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Final answer:

Extremophiles, or prokaryotes living in extreme environments, have evolved alternative mechanisms like Na+ ion gradients to maintain proton motive force in basic niches. Although 'surface protons' have been suggested by in vitro experiments, direct in vivo evidence in intact cells is still being researched. This helps us understand cellular energy generation in extreme environments and early life origins.

Step-by-step explanation:

Extremophiles are prokaryotic organisms that can survive in extreme conditions, such as high alkalinity, where traditional proton motive force (PMF) mechanisms may not operate effectively for ATP synthesis. Some extremophiles have evolved alternative mechanisms to maintain their PMF in these basic environments. For instance, the alkaliphile Bacillus firmus utilizes a Na+ ion gradient rather than a proton motive force. These adaptations highlight the diversity of metabolic strategies that have evolved to harness energy in the absence of a strong PMF. Experimental evidence suggests the existence of 'surface protons' or localized pH gradients that can sustain ATP synthesis despite an overall basic bulk pH. This might have implications for how early protocells in the prebiotic world, possibly formed in alkaline hydrothermal vents, could have generated and utilized energy.

Current research using in vitro models like lipid bilayers suggests the possibility of surface protons at cellular interfaces, contributing to localized proton gradients necessary for ATP synthesis. However, direct in vivo experimental evidence of surface protons in intact cells is still an evolving area of research. Nonetheless, these findings are crucial for understanding the early origins of life and how cells might have adapted to extreme environments outside hydrothermal vents, enabling them to colonize diverse habitats on Earth.

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