Final answer:
Recombination frequency is capped at 50% in genetic linkage analysis because this represents the point at which genes assort as if they are not linked, either on separate chromosomes or very far apart on the same chromosome.
Step-by-step explanation:
The recombination frequency cannot exceed 50% in genetic linkage analysis because a recombination frequency of 50% indicates that genes assort independently, simulating a situation where genes are on separate chromosomes or are very far apart on the same chromosome. In such cases, the assortment of these genes will mirror that of unlinked genes, which means that in a large number of offspring there will be an equal chance (50/50) of inheriting any combination of alleles from these genes. This 50 map unit cutoff reflects that there is a maximum of 50% chance for alleles to recombine, beyond which it can no longer be determined if they are linked or on separate chromosomes, thus mapping linkage becomes less accurate.