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What regions basepair to form the the Rho-independent transcription termination signal?

User Rick V
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Final answer:

Rho-independent transcription termination occurs when the RNA polymerase encounters a region rich in C-G nucleotides and forms a stable hairpin structure. This hairpin causes the polymerase to stall when it begins to transcribe a region rich in A-T nucleotides, leading to the release of the mRNA transcript.

Step-by-step explanation:

Rho-independent transcription termination is regulated by specific sequences in the DNA template strand. As the RNA polymerase nears the end of the gene being transcribed, it encounters a region rich in C-G nucleotides. The mRNA then folds back on itself, and the complementary C-G nucleotides bind together, forming a stable hairpin structure. This causes the polymerase to stall when it begins to transcribe a region rich in A-T nucleotides. The weak interaction between the complementary U-A region of the mRNA and the template DNA, combined with the stalled polymerase, leads to enough instability for the core enzyme to break away and release the new mRNA transcript.

User FrostKiwi
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