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What makes the tata box available for the complex to bind to it?

User Tifu
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Final answer:

The TATA box within the promoter region binds to the TFIID complex, making it available for binding by other transcription factors and RNA polymerase II, which initiates transcription. Its A-T rich sequence provides easier accessibility due to the lower stability of A-T hydrogen bonds under thermal movement.

Step-by-step explanation:

The TATA Box and Transcription Factor Binding

The TATA box is a crucial component within the core promoter region, typically found between 25 to 35 bases upstream of the transcriptional start site. This box contains the consensus sequence 5'-TATAAA-3' and serves as the binding site for a protein complex known as TFIID, which includes the TATA-binding protein (TBP).

Binding of TFIID to the TATA box is the first step in recruiting other essential transcription factors such as TFIIB, TFIIE, TFIIF, and TFIIH, thereby facilitating the binding of RNA polymerase to the promoter and activating the transcription initiation complex.

Transcription initiation involves several steps beginning with the TATA box being exposed to permit binding by TFIID. The accessibility of the TATA box can be attributed to the relative thermostability of its A-T interactions, which involve hydrogen bonds that are less stable than other base pair interactions and are more easily disrupted by thermal movement.

This weaker bond stability facilitates the unwinding of the DNA helix, allowing transcription factors and RNA polymerase II to bind more readily to the DNA and initiate transcription. Once RNA polymerase binds alongside these transcription factors, it is phosphorylated.

This action not only releases part of the protein from DNA but also correctly orientates RNA polymerase to begin transcription.

User Roygvib
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