Final answer:
X chromosome inactivation is linked to epigenetic changes like methylation of CpG islands, histone modifications, and incorporation of macroH2A into nucleosomes, which influence nucleosome packaging and gene expression.
Step-by-step explanation:
Inactivation of the X chromosome has been associated with various epigenetic changes. One of these changes is the methylation of many CpG islands, which contributes to the silencing of genes on the X chromosome. Another alteration involves various covalent histone modifications that lead to changes in chromatin structure and gene expression. Furthermore, the incorporation of macroH2A into nucleosomes is also associated with X chromosome inactivation. These epigenetic modifications result in changes to nucleosome packaging, impacting gene expression and the overall chromatin structure.