Q1. Anaerobe jar is used to culture anaerobic bacteria, while fluid thioglycollate media is used to determine the oxygen requirements of the bacteria. Anaerobe jar contains sodium borohydride and sodium bicarbonate which break down to CO2 and hydrogen, the later reacts with oxygen resulting in anaerobic condition. Fluid thioglycollate media is differential medium, there is a gradual increase in oxygen concetration from bottom of the tube to the top.
Q2. MacConkey agar is used to selectively isolate Gram-negative bacteria. It contains some salts and dye which inhibit most Gram-positive bacteria. Both bacteria ferment the lactose, producing acid, and it was expected for both cultures to be colored red. But, since S. aureus is Gram-positive bacteria, its growth will be inhibited, and, consequently, there will be no produced acid.
Q3: Proteins are responsible for the ability of a bacterium to ferment a sugar. Proteins include enzymes, such as beta-galactosidase or sucrase, which ferment lactose or sucrose, respectively.
Q4: In a positive starch test, alpha-amylase is detected. Alpha-amylase breaks down starch into di- and trisaccharide. If iodine solution reacts with starch, it will change color into black. But, a presence of clear halos in the medium indicates a presence of alpha-amylase because it will break down starch.
Q5: Catalase is able to break down hydrogen peroxide into water and oxygen. Still, if there is a great amount of hydrogen peroxide, catalase won't be able to break down all molecules. Its capacity is limited. So, if there is a lot of hydrogen peroxide it will eventually kill the bacteria.