Final answer:
The study you're conducting is best described as a cross-sectional observational study, which is used to collect and analyze data from a specific point in time to identify correlations between clinical factors and disease.
Step-by-step explanation:
Based on the description provided, your study design most closely aligns with a cross-sectional observational study. This type of study involves analyzing data from a population at a specific point in time. Since patients recently diagnosed with an infectious disease are being recruited to provide specimens and answer clinical survey questions without follow-up or additional timepoints, it fits the cross-sectional model where the data captured is a 'snapshot' in time, rather than following a group over a period of time like you would in longitudinal or cohort studies. In your study, you are also analyzing the correlation between clinical factors and pathogen load, which is typical for cross-sectional studies where the focus is on determining prevalence and identifying associations rather than on causal relationships.